Sample ID: BISS_502833
[analysis description + link to github repo]
| Facility | Hogwarts |
| Analyst | John Doe |
| Analysis started | 2025-05-03 01:28:15 |
| Analysis completed | 2025-05-03 01:28:15 |
| Wall time | 0:0:0 hours |
Inconclusive
Outcome: The analyst should attempt subjective species identification at the genus level.
Reasoning: [Flag 1B] 2-3 candidate species matched with high stringency (identity ≥ 98.5%).
| Preliminary morphology ID confirmed? | NA |
|
Inconclusive taxonomic identity (Flag 1B) Tortricidae. |
| Taxa of interest detected? | True |
|
Flag 2A: Taxon of interest detected in candidate species Flag 5.1A: The given locus for this taxon is well represented in reference database (>5 entries) Flag 5.2B: 10-90% of related taxa have reference sequence(s) at the given locus |
|
| Locus | COI |
| Preliminary ID | Tortricidae |
| Taxa of interest |
Ctenopseustis herana |
| Country | New Zealand |
| Host | |
| Sample ID | BISS_502833 |
| Query DNA sequence |
Flag 1B:
The analyst should attempt subjective species identification at the genus level
2-3 candidate species matched with high stringency (identity ≥ 98.5%)
Candidate hits must meet ONE of these criteria:
| Minimum alignment length |
400bp
|
| Minimum query coverage |
85.0%
|
Candidate hits have then been classified as follows:
| Classification | Alignment identity | Number of hits | Number of species |
|---|---|---|---|
| STRONG MATCH | ≥ 98.5% | 30 | 3 |
| MODERATE MATCH | ≥ 93.5% | NA | NA |
| NO MATCH | < 93.5% |
| Species | Hits | Identity | E-value | Database coverage |
|---|---|---|---|---|
| Ctenopseustis obliquana | 25 | 100.0% | 0.0 | |
| Ctenopseustis herana | 3 | 99.8% | 0.0 | |
| Ctenopseustis fraterna | 2 | 99.3% | 0.0 |
This sections shows the taxa of interest (TOI) specified by the sample submitter. Each of these taxa has been cross-referenced against the candidate species to determine if they might match the taxonomic identity of the sample. A blank row indicates a TOI that did not match any candidate species, meaning that it is unlikely that the sample matches that TOI.
| Taxon of interest | Match rank | Match taxon | Match species | Match accession | Match identity | Database coverage |
|---|---|---|---|---|---|---|
| Ctenopseustis herana | species | Ctenopseustis herana | Ctenopseustis herana | FJ225606 | 0.998 |
This analysis evaluates how many independent sources have contributed to reference sequences for each candidate species. This provides a measure of confidence in the taxonomic annotation of references sequences. A sequence that has been annotated by multiple independent sources is more likely to have a correct taxonomic annotation.
Independent sources
Flag 4B:
Reference sequence sources lack diversity and may therefore be unreliable
Reasoning: Matching sequence records for this species have only 1-5 independent sources
(found 2 sources)
2 Independent Sources
The matching reference sequences for this species have been annotated by 2 independent source(s). A source is considered independent if the author list or publication title is distinct.
Source 1
| Hit accession | Automated | Authors | Title | Journal |
|---|---|---|---|---|
| FJ225511 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225511 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225572 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225572 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (15-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225499 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225499 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225515 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225515 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225475 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225475 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225477 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225477 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225506 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225506 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225478 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225478 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225482 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225482 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225480 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225480 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225479 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225479 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225569 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225569 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (15-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225491 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225491 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225526 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225526 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225474 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225474 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225510 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225510 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225571 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225571 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (15-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225567 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225567 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (15-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225517 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225517 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225520 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225520 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225509 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225509 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (17-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225574 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225574 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (15-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| Show 42 more publications... | ||||
Source 2
| Hit accession | Automated | Authors | Title | Journal |
|---|---|---|---|---|
| AF016469 | False |
Newcomb,R.D. Gleeson,D.M. |
Can molecular-based phylogenies order events in the evolution of chemical communication within New Zealand's Tortricid moths? | Unpublished |
| AF016469 | False |
Newcomb,R.D. Gleeson,D.M. |
Direct Submission | Submitted (30-JUL-1997) Molecular Genetics, HortResearch, Private Bag 92-169, Auckland, New Zealand |
| AF016470 | False |
Newcomb,R.D. Gleeson,D.M. |
Can molecular-based phylogenies order events in the evolution of chemical communication within New Zealand's Tortricid moths? | Unpublished |
| AF016470 | False |
Newcomb,R.D. Gleeson,D.M. |
Direct Submission | Submitted (30-JUL-1997) Molecular Genetics, HortResearch, Private Bag 92-169, Auckland, New Zealand |
| AF016481 | False |
Newcomb,R.D. Gleeson,D.M. |
Can molecular-based phylogenies order events in the evolution of chemical communication within New Zealand's Tortricid moths? | Unpublished |
| AF016481 | False |
Newcomb,R.D. Gleeson,D.M. |
Direct Submission | Submitted (30-JUL-1997) Molecular Genetics, HortResearch, Private Bag 92-169, Auckland, New Zealand |
| Show 4 more publications... | ||||
Independent sources
Flag 4B:
Reference sequence sources lack diversity and may therefore be unreliable
Reasoning: Matching sequence records for this species have only 1-5 independent sources
(found 1 sources)
1 Independent Source
The matching reference sequences for this species have been annotated by 1 independent source(s). A source is considered independent if the author list or publication title is distinct.
Source 1
| Hit accession | Automated | Authors | Title | Journal |
|---|---|---|---|---|
| FJ225606 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225606 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (18-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225603 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225603 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (18-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225561 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225561 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (11-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| Show 4 more publications... | ||||
Independent sources
Flag 4B:
Reference sequence sources lack diversity and may therefore be unreliable
Reasoning: Matching sequence records for this species have only 1-5 independent sources
(found 1 sources)
1 Independent Source
The matching reference sequences for this species have been annotated by 1 independent source(s). A source is considered independent if the author list or publication title is distinct.
Source 1
| Hit accession | Automated | Authors | Title | Journal |
|---|---|---|---|---|
| FJ225537 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225537 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (10-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| FJ225542 | False |
Langhoff,P. Authier,A. Buckley,T.R. Dugdale,J.S. Rodrigo,A. Newcomb,R.D. |
DNA barcoding of the endemic New Zealand leafroller moth genera, Ctenopseustis and Planotortrix | Mol Ecol Resour 9 (3), 691-698 (2009) |
| FJ225542 | False |
Langhoff,P. Authier,A. Newcomb,R.D. |
Direct Submission | Submitted (10-SEP-2008) HortResearch, 120 Mt. Albert Road, Auckland, New Zealand |
| Show 2 more publications... | ||||
This section provides a phylogeny of the candidate reference sequences. The analyst can use this to make a subjective observation on how well the reference sequences are able to distinguish between species. If the phylogeny shows distinct clades for each species, we can be confident that the molecular data are capable of distinguishing between those species. However, if the phylogeny shows overlap between species, this reduces the capacity of the molecular data to confidently distinguish between those species. In some cases, we may see the query sequence falling outside of the adjacent species' clades, which indicates that our query species is not represented in the reference database, which could indicate a rare or novel species.
The following resources can be used to ensure that the given taxonomy is legitimate and current.
| Taxa | Database |
|---|---|
| General | GBIF |
| General | ITIS |
| Mealybugs & scale | ScaleNet database |
| Thrips | Thripswiki |
| Spider Mites | Spider Mites Database |
| Psocodea (Barklice, Booklice, and Parasitic Lice) | Psocodea Species File Online |
| Orthoptera | Orthoptera Species File Online |
| Drosophilidae | TaxoDros |
| Diptera |
Catalog of the Diptera of the Australasian and Oceanian Regions
Systema Dipterorum |
| Aphids | Aphid Species File |
| Ants |
AntWeb
AntCat |
| Lepidoptera (butterflies and moths) | The Global Lepidoptera Names Index |
| Gracillariidae (primitive moths) | Global Taxonomic Database of Gracillariidae |
| Pyralidae (pyralid moths) | Global Information System on Pyraloidea |
| Tortricidae (tortrix moths) | Tortricidae Resources on the Net |